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Explainer12 min

The artifact bestiary

A field guide to everything on an EEG trace that did not come from the brain. Blinks, eye movements, jaw, heart, sweat, pops, hum. How each looks, where it lives, and how to stop it at the source.

AssumesProject B: One channel of youSpineAnalog / mixed-signal hardwareDecoding / signal processing / ML
On this page12 min
  1. The specimens
  2. How to tell brain from not-brain

Most of what a scalp records is not brain. Blinks are ten times the size of alpha. A clenched jaw drowns everything above 20 Hz. The heart leaks in as a small once a second. Sweat makes the whole trace wander. Learn to recognize each one by eye and you will spend the rest of your career not fooling yourself. Every specimen below is on the simulator; press its button and watch.

Press the buttonsSimulated signal
This interactive needs JavaScript. If you are reading a printout, the caption describes what it shows.
Figure 1. The bestiary's specimens, on demand. Press each button with the filters off, then with them on.

The specimens

Eight specimens
This interactive needs JavaScript. If you are reading a printout, the caption describes what it shows.
Figure 2. The field guide. Each card is four seconds of a single channel with one specimen in it, drawn from the same model as the simulator above. Tap a card to enlarge it and read its tell. The first card is brain, for comparison.

Blink. A smooth, rounded deflection, 100 to 300 µV, about 300 milliseconds wide, largest at the forehead (Fp1, Fp2) and shrinking toward the back, same sign in both frontal channels. It is the eyeball rotating upward under the closing lid, which moves the eye’s standing dipole. Nobody blinks less than about ten times a minute, so a recording without blinks is a recording with a bad frontal . At the source: ask people to blink freely between trials and hold still during them; never ask them not to blink, which produces a tense person who blinks anyway.

Eye movement. A step, not a bump, on the channels beside the eyes, opposite signs left and right for a horizontal look. Held gaze holds the step. Slow drifts of gaze look like slow drifts of baseline. At the source: a fixation point.

Jaw and face muscle. A burst of dense, spiky, high-frequency activity, mostly above 20 Hz, largest at the temples and back of the head where the temporalis and neck muscles are. Chewing, talking, swallowing, frowning, and the tense clench of someone trying too hard. It overlaps the beta and gamma bands and cannot be filtered away without losing them. At the source: relax the jaw, rest the head, and do not record a person who is speaking.

Heart. A small, sharp about once a second, regular, most visible near the ears and on the reference, tiny at the vertex. It is the ’s QRS complex, a millivolt on the chest leaking to the head as a few microvolts. In an averaged it can appear as a fake component if the heartbeat happens to line up with the stimulus. At the source: mostly you cannot; you learn to see it, and removes it in Phase 2.

Sweat and drift. A slow wander of the whole baseline over seconds to minutes, on one or all channels. Sweat changes the skin’s chemistry under the and shifts its offset; so does the paste slowly settling. At the source: a cool room, time for the to settle, and a 0.5 Hz high-pass.

pop. A sudden step or on one channel, followed by a slow exponential recovery, with nothing on the neighbours. The ’s contact changed: a cup lifted, the paste cracked, a lead was tugged. At the source: fresh paste, tape, and leads that do not pull.

Hum. A steady sinusoid at 60 Hz (50 outside North America), on every channel, that changes size when you move a lamp cord. See why the hum for the ordered list.

Movement. Everything at once: a large low-frequency swing plus muscle plus a pop, as the head moves and the shift. Recognizable because it is on all channels and ugly. At the source: a comfortable chair and a short recording.

Pulse. A slow rhythmic wobble at the heart rate, on one channel, when an sits on an artery (the temples are the usual place). It is the vessel moving the . Distinguish it from the heart by its shape: smooth, not sharp. At the source: move the a centimetre.

Reference contamination. Every channel shows the same at the same time, whatever it is. That means it is on the , which is subtracted from every channel. At the source: a reference somewhere quiet, and a linked-ears or average reference in Phase 2.

Predict before you look

Every channel of a 16-channel recording shows the same slow wobble at the same moment. Where is the problem?

The . Every channel is active minus reference, so anything on the reference appears, identically, on all of them. When an is suspiciously uniform, look there first.

How to tell brain from not-brain

Figure 3. The same specimens, on a frequency axis, with the band you actually want at the top. Nothing you care about is free of company, which is the reason the honest answer to an artifact is almost always to stop it at the source rather than to filter it out.
A real seizure
This interactive needs JavaScript. If you are reading a printout, the caption describes what it shows.
Figure 3. And this is brain when it is unmistakably brain: a real seizure from the CHB-MIT scalp EEG database, channel T7-P7, with the clinician's annotated onset marked. Notice the rhythm that builds and sharpens, on a channel where nothing else changed. Scrub back to see the ordinary EEG before it.

Three questions. Does it have the right shape? Brain rhythms wax and wane; are steps, , or steady tones. Does it have the right geography? Alpha is at the back, mu is at the top, blinks are at the front, muscle is at the edges, and an on one channel alone is an . Does it happen at the right time? Anything locked to a blink, a heartbeat, a swallow, or the moment the subject moved is not the response you were looking for.

Deep dive Remove, reject, or keep 4 min

Three strategies, roughly in order of preference. Prevent at the source, using the list above; a clean recording beats any algorithm. Reject the contaminated stretches: for epoched experiments, throw out trials whose amplitude exceeds a threshold, and report how many. Remove with a model: regression against an channel for blinks, or , which finds the blink and heartbeat as separate components and lets you subtract them. Phase 2’s artifact removal explainer does all three properly. The thing never to do is nothing, while claiming the data are clean.

Deep dive When the artifact is the signal 2 min

Every specimen above is somebody’s signal. The blink is , and is the joystick in Project D and half of the Phase 5 speller. The jaw burst is , and is the silent-speech interface. The heart is . The sweat drift is galvanic skin response, which lie detectors and stress monitors use. What counts as noise depends entirely on what you were trying to measure, and a good engineer knows what everyone else on the head is hearing.

Recall
How do you distinguish a blink from an eye movement on the trace?
A blink is a rounded bump about 300 ms wide, same sign in both frontal channels. A horizontal eye movement is a step that holds while gaze holds, with opposite signs on the left and right sides.
Recall
Why can't jaw muscle artifact be filtered out?
Its energy is above 20 Hz, overlapping the beta and gamma bands, so any filter that removes it removes those too. It has to be prevented at the source or the stretch rejected.
Recall
An artifact appears identically on every channel. What does that tell you?
It is on the reference electrode, which is subtracted from every channel.
Explain it to your roommate

Explain what this page was about to your roommate in three sentences. No jargon they would not know.