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Datasets, software, books, courses, communities

Resources

Everything the lessons point to, in one place, with the phase where each first becomes useful.

Datasets

NameWhatPhase
PhysioNet EEG Motor Movement/Imagery109 people, 64 channels, motor execution and imagery. Free, no application. The first real EEG you should load.1
BCI Competition IV, dataset 2aNine subjects, four-class motor imagery, 22 channels. The benchmark everyone reports on.3
DANDI archiveNeurophysiology data in NWB format, including human intracortical recordings behind BrainGate and speech-BCI papers.3
MIMIC-IVDe-identified ICU records from Beth Israel Deaconess. Requires CITI training and a data-use agreement. For the clinical-data spine.3
MOABB dataset collectionDozens of public motor-imagery, P300, and SSVEP datasets, downloaded and formatted by one library.3
OpenNeuroHundreds of BIDS-formatted EEG, MEG, and MRI datasets.3
Sleep-EDF ExpandedWhole-night PSG recordings with expert sleep-stage labels. The training set for a sleep stager.3
TUH EEG CorpusTens of thousands of clinical EEGs from Temple University Hospital, with a labelled seizure subset. Requires a signed request form.3
Allen Brain ObservatoryLarge-scale mouse visual cortex recordings, Neuropixels and two-photon, with an excellent SDK.4
CRCNS data sharingCurated animal neurophysiology datasets, with the original papers.4

Software

NameWhatPhase
MNE-PythonThe standard EEG/MEG analysis library. Learn it in Phase 1 with the tutorials; you will use it for four years.1
BrainFlowOne API for OpenBCI and most consumer headsets, with Python bindings.2
KiCadFree schematic and PCB layout software. The ADS1299 board is drawn here.2
Lab Streaming LayerTimestamped, synchronized streaming between devices and stimulus programs. Learn it before your first experiment.2
Onshape (free for students) or Fusion 360Parametric CAD in the browser for headsets, electrode holders, and phantom molds.2
PsychoPyStimulus presentation with millisecond timing, free.2
BraindecodeDeep learning for EEG in PyTorch, with EEGNet and friends built in.3
MOABBBenchmarks classifiers across public datasets identically. Use it so your numbers mean something.3
pyRiemannRiemannian-geometry classifiers for EEG covariance matrices; the strongest simple baseline.3
Brian2Spiking network simulator in Python; write the equations, run the network.4
SpikeInterfaceA common interface to every spike sorter, with quality metrics.4
Open EphysOpen-source acquisition hardware and GUI for animal electrophysiology.6

Books

NameWhatPhase
David Eagleman, LivewiredPlasticity and sensory substitution for a general reader. Good motivation for Phase 5.1
Kandel et al., Principles of Neural ScienceThe reference text of neuroscience. A chapter a week for four years. About $152 new for the sixth edition, about $70 used for the fifth.1
Miguel Nicolelis, Beyond BoundariesA first-person history of BCI research by one of its founders. Read for the story.1
Horowitz and Hill, The Art of ElectronicsThe hardware spine's bible. Chapters on op-amps, noise, and precision circuits are directly about your amplifier.2
Mike X Cohen, Analyzing Neural Time Series DataThe practical guide to time-frequency analysis, with code. Pairs with his free video lectures.2
Webster (ed.), Medical Instrumentation: Application and DesignThe classic on biopotential amplifiers, electrodes, and electrical safety. Old, still right.2
Bin He (ed.), Neural EngineeringGraduate-level survey chapters across the field; read the chapters that match your spine.3
Steven Luck, An Introduction to the Event-Related Potential TechniqueEverything about running and analyzing ERP experiments without fooling yourself.3
Rajesh Rao, Brain-Computer InterfacingThe best single textbook introduction to BCI, from signals to decoders to ethics.3
Dayan and Abbott, Theoretical NeuroscienceThe standard computational neuroscience text; dense, rewarding, about $40 in paperback. The authors' page has a sample chapter and the exercises, not the book.4
Sterratt et al., Principles of Computational Modelling in NeuroscienceGentler than Dayan and Abbott on the modelling side, with worked examples.4
Zenios, Makower, Yock, BiodesignThe textbook of needs-driven medical technology innovation. Phase 5's spine.5

Papers

NameWhatPhase
Merrill, Bikson, Jefferys, "Electrical stimulation of excitable tissue" (J Neurosci Methods 2005)The review of stimulation electrochemistry and safety everyone in neuromodulation has read.6

Courses

NameWhatPhase
MIT OpenCourseWare 9.01 and 9.40Introduction to neuroscience, and introduction to neural computation, with full lectures.1
Computational Neuroscience (University of Washington, Coursera)Rao and Fairhall's introductory course. A free trial and financial aid; the plain audit option is no longer offered on the enrolment page.4
Neuromatch AcademyOnline, three weeks in July. The best crash course in computational neuroscience and a real alumni network. No longer free; about $566 for an unreimbursed US student.4

Video

NameWhatPhase
3Blue1Brown, "But what is the Fourier Transform?"The visual intuition for the spectrum, in twenty minutes.1
EEVblog and Applied Science (YouTube)Practical electronics and scientific instrument building, for the hardware spine.1
Mike X Cohen's YouTube lecturesHundreds of short lectures on signal processing for neuroscience, with MATLAB and Python.2

Communities

NameWhatPhase
NeurotechXGlobal neurotech community with a Slack, student clubs, and hackathons.1
OpenBCI forumWhere hobbyist and research EEG problems get solved in public.1
GOSH (Gathering for Open Science Hardware)The open-hardware-for-science community; where instrument builders compare notes.2
BCI SocietyThe field's professional society; cheap student membership, small biennial meeting.3

Journals

NameWhatPhase
Journal of Neural EngineeringThe field's home journal. Skim the table of contents monthly.3
IEEE Transactions on Neural Systems and Rehabilitation EngineeringThe other home journal, more engineering-flavoured.3
Neuron and Nature NeuroscienceWhere the neuroscience results land. Read the abstracts; read one paper a month properly.4

Podcasts

NameWhatPhase
Global Medical Device PodcastRegulatory and quality talk from people who do it. Phase 5 background listening.5